../../tmp/servers/virsirnadb/1065668446
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi2031 | 1 | ggactgcaaacactacctt | 19 | |
| L24917.1 | HRVPP Human rhinovirus type 16 polyprotein gene, complete CDS | 1977 | ................... | 1995 | 100 |
| L24917.1 | HRVPP Human rhinovirus type 16 polyprotein gene, complete CDS | 3363 | __...........a.____ | 3375 | 63 |
| FJ445162.1 | Human rhinovirus 84 strain ATCC VR-1194, complete genome | 2446 | ___.........g...... | 2461 | 78 |
| D00239.1 | HRVACG Human rhinovirus 1B, complete genome | 1980 | .............c..___ | 1995 | 78 |
| D00239.1 | HRVACG Human rhinovirus 1B, complete genome | 3315 | ______..........___ | 3324 | 52 |
| FJ445111.1 | Human rhinovirus 1 strain ATCC VR-1559, complete genome | 1984 | .............a..___ | 1999 | 78 |
| FJ445128.1 | Human rhinovirus 33 strain ATCC VR-330, complete genome | 1974 | .t..............___ | 1989 | 78 |
| FJ445128.1 | Human rhinovirus 33 strain ATCC VR-330, complete genome | 3306 | ______..........___ | 3315 | 52 |
| EF173417.1 | Human rhinovirus 64, complete genome | 1779 | __...........a..___ | 1792 | 68 |
| EF173417.1 | Human rhinovirus 64, complete genome | 5625 | _______..........._ | 5615 | 57 |
| FJ445181.1 | Human rhinovirus 64 strain ATCC VR-1174, complete genome | 1779 | __...........a..___ | 1792 | 68 |
| FJ445181.1 | Human rhinovirus 64 strain ATCC VR-1174, complete genome | 5625 | _______..........._ | 5615 | 57 |
| FJ445147.1 | Human rhinovirus 65 strain ATCC VR-1175, complete genome | 1978 | .t...........c.____ | 1992 | 68 |
| DQ473511.1 | Human rhinovirus 55, complete genome | 3266 | __...........a.____ | 3278 | 63 |
| FJ445131.1 | Human rhinovirus 43 strain ATCC VR-1153, complete genome | 3366 | __...........a.____ | 3378 | 63 |
| FJ445150.1 | Human rhinovirus 68 strain ATCC VR-1178, complete genome | 3402 | __...........a.____ | 3414 | 63 |
| FJ445154.1 | Human rhinovirus 77 strain ATCC VR-1187, complete genome | 3366 | __...........a.____ | 3378 | 63 |
| GQ415051.1 | Human rhinovirus A isolate hrv-A101, complete genome | 3368 | __...........a.____ | 3380 | 63 |
| FJ445130.1 | Human rhinovirus 42 strain ATCC VR-338, complete genome | 2370 | ___.a.........gg... | 2385 | 68 |
| FJ445130.1 | Human rhinovirus 42 strain ATCC VR-338, complete genome | 2085 | .........t.._______ | 2096 | 57 |
| DQ875932.2 | Human rhinovirus C strain NY-074 polyprotein gene, complete cds | 2071 | _..........c.a.____ | 2058 | 63 |
| FJ445145.1 | Human rhinovirus 62 strain ATCC VR-1172, complete genome | 2094 | .........t.._______ | 2105 | 57 |
| FJ445145.1 | Human rhinovirus 62 strain ATCC VR-1172, complete genome | 1905 | _____..........____ | 1914 | 52 |
| FJ445149.1 | Human rhinovirus 67 strain ATCC VR-1177, complete genome | 2201 | _.c..........______ | 2212 | 57 |
| FJ445149.1 | Human rhinovirus 67 strain ATCC VR-1177, complete genome | 1783 | ______..........___ | 1792 | 52 |
| FJ445149.1 | Human rhinovirus 67 strain ATCC VR-1177, complete genome | 5627 | ________.........._ | 5618 | 52 |
| FJ445137.1 | Human rhinovirus 52 isolate F10, complete genome | 5027 | __.........._______ | 5036 | 52 |
| FJ445168.1 | Human rhinovirus 91 strain ATCC VR-1292, complete genome | 6223 | ________.........._ | 6232 | 52 |
| DQ473500.1 | Human rhinovirus 59, complete genome | 3364 | __.........._______ | 3373 | 52 |
| DQ473502.1 | Human rhinovirus 76, complete genome | 3306 | ______..........___ | 3315 | 52 |
| DQ473505.1 | Human rhinovirus 36, complete genome | 4776 | .a.a.t..tg......... | 4794 | 73 |
| DQ473507.1 | Human rhinovirus 53, complete genome | 3534 | ___..........______ | 3543 | 52 |
| DQ473509.1 | Human rhinovirus A, complete genome | 3307 | ______..........___ | 3316 | 52 |
| EF173419.1 | Human rhinovirus 94, complete genome | 3362 | __.........._______ | 3371 | 52 |
| FJ445113.1 | Human rhinovirus 8 strain ATCC VR-1118, complete genome | 4560 | ________.........._ | 4569 | 52 |
| FJ445114.1 | Human rhinovirus 9 isolate F01, complete genome | 3309 | ______..........___ | 3318 | 52 |
| FJ445115.1 | Human rhinovirus 9 isolate F02, complete genome | 2087 | _..........________ | 2078 | 52 |
| FJ445115.1 | Human rhinovirus 9 isolate F02, complete genome | 3308 | ______..........___ | 3317 | 52 |
| FJ445116.1 | Human rhinovirus 13 strain ATCC VR-1123, complete genome | 3374 | __.........._______ | 3383 | 52 |
| FJ445120.1 | Human rhinovirus 20 strain ATCC VR-1130, complete genome | 3401 | __.........._______ | 3410 | 52 |
| FJ445122.1 | Human rhinovirus 22 strain ATCC VR-1132, complete genome | 3304 | ______..........___ | 3313 | 52 |
| FJ445126.1 | Human rhinovirus 31 strain ATCC VR-506, complete genome | 3304 | ______..........___ | 3313 | 52 |
| FJ445133.1 | Human rhinovirus 47 strain ATCC VR-1157, complete genome | 3305 | ______..........___ | 3314 | 52 |
| FJ445140.1 | Human rhinovirus 56 strain ATCC VR-1166, complete genome | 3309 | ______..........___ | 3318 | 52 |
| FJ445146.1 | Human rhinovirus 63 strain ATCC VR-1173, complete genome | 5014 | _____..........____ | 5023 | 52 |
| FJ445167.1 | Human rhinovirus 90 strain ATCC VR-1291, complete genome | 3354 | __.........._______ | 3363 | 52 |
| FJ445170.1 | Human rhinovirus 95 strain ATCC VR-1301, complete genome | 4562 | ________.........._ | 4571 | 52 |
| FJ445171.1 | Human rhinovirus 96 strain ATCC VR-1296, complete genome | 1245 | _______..........__ | 1236 | 52 |
| FJ445173.1 | Human rhinovirus 98 strain ATCC VR-1298, complete genome | 5006 | _____..........____ | 5015 | 52 |
| FJ445175.1 | Human rhinovirus 100 strain ATCC VR-1300, complete genome | 3313 | ______..........___ | 3322 | 52 |
| FJ445182.1 | Human rhinovirus 76 strain ATCC VR-1186, complete genome | 3305 | ______..........___ | 3314 | 52 |
| FJ445185.1 | Human rhinovirus 94 strain ATCC VR-1295, complete genome | 3362 | __.........._______ | 3371 | 52 |